metagenomics | Scholarship for Nigerians and Africans

PhD Fellowships in Molecular Microbial Ecology, Denmark

The aim of this research project is to further develop and improve the modern microbial metagenomics tools to study natural microbial communities. In this project we will use high throughput sequencing to study the composition of bacterial communities in various natural environments with great resolution.
Furthermore, the project includes studies of the presence and evolution of plasmid-borne traits in different natural habitats in order to resolve the role of the mobile gene pool in microbial adaptation. We are specifically interested in studying the effect of anthropogenic activity on the evolution and prevalence of multi resistant bacteria.

We expect that the applicants have obtained an MSc degree in biology or biochemistry, a good grasp of theoretical concepts, and some expertise in laboratory techniques used in molecular microbial ecology, DNA sequencing and bioinformatic analysis. Fluency in English is a requirement.

An assessment committee will be appointed to evaluate the applications. The final selection will be made by the supervisors, Søren J. Sørensen and Lars H. Hansen and the Head of Department, based on the recommendations of the evaluation committee. Successful candidates will then be requested to formally apply for enrolment as a PhD student at the PhD school of Science, University of Copenhagen.

Scholarship Application Deadline:14 April 2011

Further Scholarship Information and Application

2 PhD Positions in Evolutionary Ecology of Host-Microbiota Interactions, Switzerland

We are looking for highly motivated candidates with an interest in evolutionary and microbial genomics, metagenomics and microbiota community structure. Knowledge in any of the following fields is helpful: microbiology, bio-informatics, population genetics, experimental evolutionary ecology, metagenomics and evolutionary genomics. The positions are funded to work on the functional aspects of host-microbiome interactions in Daphnia. The suggested methodology includes comparative meta-genomics, experimental studies of hostmicrobe/ microbiota interactions, QTL typing, and population surveys. Previous experience with Daphnia is not required, but excellent written, verbal, and interpersonal skills, good work ethics, and the ability to think creatively and critically are desired. The working language at the institute is English. Starting dates are flexible, from April 2011 onwards. Please send your application by E-mail to Dieter Ebert (dieter.ebert-at-unibas.ch). Applications should include a single pdf-file containing CV, a list of publications (if any) and a 1 page description of your research interests and motivation. Please give names and email addresses of two persons who are willing to write a letter of recommendation.
Scholarship Application Deadline: 20 January 2011
Further Scholarship Information and Application

2 Postdoctoral Positions in Evolutionary Microbial (Meta-)Genomics, Switzerland

This fellowship is available in the research group of Dieter Ebert (University of Basel, Switzerland). The research group has an emphasis on the evolution and genetics of host-symbiont interactions

We are looking for highly motivated candidates with an interest in evolutionary and microbial genomics, metagenomics and microbiota community structure. A background in any of the following fields is desired: microbiology, bio-informatics,
population genetics, experimental evolutionary ecology, metagenomics and evolutionary genomics. The positions are funded to work on the population structure and functional aspects of host-microbiome interactions in Daphnia. The suggested methodology includes metagenome approaches, comparative metagenomics, experimental studies of host-microbe interactions, QTL typing, and population surveys. Previous experience with Daphnia is not required, but excellent written, verbal, and interpersonal skills, good work ethics, and the ability to think creatively and critically are desired. The working language at the institute is English. Starting dates are flexible, from April 2011 onwards. Positions are funded for 3 years with a 1 year trial period.
Fellowship Application Deadline: 20 January 2011
Further Fellowship Information and Application